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13/1/2026

EndNote: Checking your document for reference management systems

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In a previous post, I mentioned a document that I had edited that used EndNote, which, the authors had confidently reassured me, meant that the references would cause me no problems, and it turned out, to no one's surprise, that a few issues had cropped up. This post describes one of the issues – and it was one that I hadn't anticipated.
I was  lucky because the document used an author, date referencing system. Otherwise, it's possible that I might not even have noticed there was a problem. 

Here's how I discovered the problem

I was quite a long way through editing the document when I came across a reference citations that had "et al." in italic where roman was used in other citations. I've mocked up a paragraph below so that you can see what text might have looked like: 
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I switched over to look at the EndNote library so that I could check that all the data fields had been correctly filled in, but the reference wasn't in the library.



​Right-clicking on the citation field and selecting 'Toggle Field Codes' uncovered the problem:
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The citation had been entered using Zotero – another reference management system!
This was obvious looking at the field code (truncated in the image below):
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This made me think – if there hadn't been a discrepancy in how the citation had been displayed, would I even have noticed the problem? In a document with plain-text references, checking that each citation has a corresponding reference in the reference list is a standard copy-editing task, but in a document that has been referenced with EndNote, I tend to assume that all the citations will be referenced in the bibliography at the end of the document.

What did I do about it?

I decided to ask ChatGPT to write a macro for me to detect what reference manager systems had been used in the document. This turned out to be a reasonably simple request and after a couple of iterations, I've ended up with a macro that summarizes which reference managers have been used in the document and uses different coloured font for citations added with different systems.


​In the document I was working on, the macro detected that there were 572 EndNote citations and 34 Zotero citations.​
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Using different coloured font for the citations meant that it was easy to spot which references needed to be updated:
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The macro may well not be perfect – my macro programing skills are limited so it's difficult for me to check it other than by using it on different documents – but it does seem to work, so, if you think it might be useful, you can find it here. Use this macro to reset the citation text colour.

Let me know if this referency system detection macro works for you!


Remember to be careful when installing other people's macros onto your system!

For other EndNote tips, see:
Using EndNote to style references in documents that don't use EndNote
What you need to edit documents that use EndNote
What to watch out for when you're editing with EndNote
Using abbreviations for journal names in EndNote

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Andrea at Yours Truleigh Editing.
www.yourstruleighediting.com

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    Author

    Andrea at Yours Truleigh Editing
    I'm an editor based on the south coast of the United Kingdom. I use Word tools to make the editing process as effiicient and accurate as possible, and I'm hoping to share some of the tips and techniques I've picked up along the way. I'm an enthusiastic and grateful member of the Chartered Institute of Editing and Proofreading. Editorial freelancers benefit hugely from being part of supportive organizations:  for direct support for our work, such as training and providing routes for our clients to find us, but also for community, which is needed now more than ever. 
    Please note: all Word tips are based on Word 365 for PC. 

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